STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106608360Protein FAM84A-like. (258 aa)    
Predicted Functional Partners:
ankrd55
Ankyrin repeat domain-containing protein 55.
      
 0.599
LOC106613501
Phospholipid-metabolizing enzyme A-C1-like isoform X1.
      
 0.593
LOC106574158
Phospholipid-metabolizing enzyme A-C1-like.
      
 0.511
ENSSSAP00000025354
annotation not available
      
 0.475
LOC106606365
Radical S-adenosyl methionine domain-containing protein; May be a heme chaperone, appears to bind heme. Homologous bacterial proteins do not have oxygen-independent coproporphyrinogen- III oxidase activity. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L- methionine; Belongs to the anaerobic coproporphyrinogen-III oxidase family.
      
 0.472
LOC106601991
Radical S-adenosyl methionine domain-containing protein 1, mitochondrial-like.
      
 0.472
KIAA0355
Uncharacterized protein KIAA0355-like isoform X1.
      
 0.463
LOC106587568
Uncharacterized protein KIAA0355-like isoform X1.
      
 0.463
LOC106587581
Uncharacterized protein KIAA0355-like.
      
 0.463
sf3b3-2
Splicing factor 3B subunit 3.
      
 0.420
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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