STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106607450SUMO-conjugating enzyme UBC9-like; Belongs to the ubiquitin-conjugating enzyme family. (158 aa)    
Predicted Functional Partners:
SUMO1
Small Ubiquitin-related modifier 1.
   
 0.995
LOC106586530
E3 SUMO-protein ligase RanBP2-like isoform X1.
   
 0.994
LOC106574244
Small ubiquitin-related modifier.
   
 0.991
LOC106582552
Small ubiquitin-related modifier.
   
 0.991
sae2
SUMO-activating enzyme subunit 2; The heterodimer acts as an E1 ligase for SUMO1, SUMO2, SUMO3, and probably SUMO4. It mediates ATP-dependent activation of SUMO proteins followed by formation of a thioester bond between a SUMO protein and a conserved active site cysteine residue on UBA2/SAE2. Belongs to the ubiquitin-activating E1 family.
   
 0.989
LOC106609338
Ran GTPase-activating protein 1-like.
   
 0.975
rgp1
Retrograde Golgi transport protein RGP1 homolog.
   
 0.975
LOC106607164
Ran GTPase-activating protein 1-like isoform X2.
   
 0.975
LOC106601802
Small ubiquitin-related modifier.
   
 0.968
LOC106587120
Small ubiquitin-related modifier.
   
 0.968
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.