STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSSAP00000004424annotation not available (113 aa)    
Predicted Functional Partners:
md2l1
Mitotic spindle assembly checkpoint protein MAD2A.
   
 0.980
LOC106577502
Mitotic spindle assembly checkpoint protein MAD2A-like.
   
 0.980
anapc4
Anaphase-promoting complex subunit 4; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin ligase that controls progression through mitosis and the G1 phase of the cell cycle. Belongs to the APC4 family.
    
 0.964
LOC106584102
Anaphase-promoting complex subunit 4-like.
    
 0.964
LOC100380698
Cell division cycle protein 23 homolog isoform X3.
    
 0.962
LOC106567795
Anaphase-promoting complex subunit CDC26-like.
    
 0.962
cdc26
Anaphase-promoting complex subunit CDC26 isoform X1.
    
 0.962
CDC23
Cell division cycle protein 23 homolog.
    
 0.962
cdc27
Cell division cycle protein 27 homolog isoform X1.
    
 0.961
LOC106600875
Cell division cycle protein 27 homolog isoform X2.
    
 0.961
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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