STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106611271Homeobox protein goosecoid-like isoform X1. (241 aa)    
Predicted Functional Partners:
LOC106566276
LOW QUALITY PROTEIN: pre-mRNA-splicing factor ISY1 homolog.
    
   0.925
cp063
LisH domain-containing protein C16orf63 homolog.
    
   0.892
tekt2
Tektin-2 isoform X1.
    
   0.892
ENSSSAP00000054193
annotation not available
    
   0.892
LOC106560853
Protein FAM192A-like isoform X1.
    
   0.892
LOC106605018
RRP15-like protein.
    
   0.892
RRP15
RRP15-like protein.
    
   0.892
fam192a
Protein FAM192A isoform X3.
    
   0.892
LOC106564614
LisH domain-containing protein C16orf63 homolog.
    
   0.892
LOC106574807
MOB-like protein phocein.
    
   0.851
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.