STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106609593Staphylococcal nuclease domain-containing protein 1-like. (178 aa)    
Predicted Functional Partners:
LOC106605532
Protein LYRIC-like isoform X1.
    
 
 0.944
lyric
LYRIC protein.
    
 
 0.944
LOC106589130
Protein LYRIC-like isoform X2.
    
 
 0.944
piwil1
Piwi-like protein 1; Belongs to the argonaute family.
   
 0.857
ENSSSAP00000071560
annotation not available
   
 0.852
tdrkh
Tudor and KH domain-containing protein isoform X2.
   
 0.712
LOC106612084
Neutral alpha-glucosidase AB-like isoform X2; Belongs to the glycosyl hydrolase 31 family.
   
    0.674
LOC106604381
Neutral alpha-glucosidase AB-like isoform X3; Belongs to the glycosyl hydrolase 31 family.
   
    0.674
ganab
Neutral alpha-glucosidase AB isoform X1; Belongs to the glycosyl hydrolase 31 family.
   
    0.674
drosha
Ribonuclease 3 isoform X1.
  
  
 0.641
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.