STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cutcCopper homeostasis protein cutC homolog. (291 aa)    
Predicted Functional Partners:
rad51c
DNA repair protein RAD51 homolog 3.
      
 0.750
LOC106565995
GDH/6PGL endoplasmic bifunctional protein-like.
  
  
 0.678
LOC106582765
GDH/6PGL endoplasmic bifunctional protein-like.
  
  
 0.678
gnpi
Glucosamine-6-phosphate isomerase.
 
   
 0.657
LOC106604227
Glucosamine-6-phosphate isomerase.
 
   
 0.656
LOC106612224
Glucosamine-6-phosphate isomerase.
 
   
 0.655
LOC106566853
OTU domain-containing protein 3-like.
     
 0.636
otud3
OTU domain-containing protein 3.
     
 0.636
guf1
Translation factor GUF1, mitochondrial; Promotes mitochondrial protein synthesis. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Binds to mitochondrial ribosomes in a GTP-dependent manner.
     
 0.636
gsr
Zinc transporter 9.
  
  
 0.629
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.