STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106597479Beta-1,4-galactosyltransferase 1-like. (254 aa)    
Predicted Functional Partners:
pomgnt1
Protein O-linked-mannose beta-1,2-N-acetylglucosaminyltransferase 1.
   
 0.921
mgt5b
Alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase B-like isoform X2.
     
 0.919
LOC106588199
Alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase B-like isoform X2.
     
 0.919
LOC106584309
Hexosyltransferase.
   
 
 0.917
b3gnt5
Hexosyltransferase.
   
 
 0.916
LOC106568751
Hexosyltransferase.
   
 
 0.916
LOC106575305
Hexosyltransferase.
   
 
 0.915
B3GALT1
Hexosyltransferase.
   
 
 0.915
B3GALT1-2
Hexosyltransferase.
   
 
 0.915
LOC106613948
Hexosyltransferase.
   
 
 0.914
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.