STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106607212Sphingosine 1-phosphate receptor 2-like; Belongs to the G-protein coupled receptor 1 family. (373 aa)    
Predicted Functional Partners:
LOC106601288
Ribonucleoprotein PTB-binding 1-like isoform X1.
      
 0.591
LOC106607209
Eukaryotic translation initiation factor 3 subunit G; RNA-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. This subunit can bind 18S rRNA.
      
 0.550
eif3g
Salmo salar eukaryotic translation initiation factor 3, subunit G (eif3g), mRNA.
      
 0.550
dmap1
DNA methyltransferase 1-associated protein 1 isoform X2.
      
 0.517
LOC106564104
Hsp90 co-chaperone Cdc37-like.
      
 0.472
LOC106601286
Hsp90 co-chaperone Cdc37-like.
      
 0.465
LOC106607217
Hsp90 co-chaperone Cdc37-like.
      
 0.465
ENSSSAP00000004368
annotation not available
      
 0.457
ENSSSAP00000007893
Sphingosine kinase 2-like.
      
 0.457
LOC106577300
Sphingosine kinase 2-like.
      
 0.457
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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