STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106610663YTH domain-containing family protein 2-like. (625 aa)    
Predicted Functional Partners:
LOC106573129
Zinc finger C3H1 domain-containing protein-like isoform X1.
    
 
 0.657
LOC106561542
Zinc finger C3H1 domain-containing protein-like isoform X1.
    
 
 0.657
mettl3
N6-adenosine-methyltransferase 70 kDa subunit; Belongs to the MT-A70-like family.
  
   
 0.652
LOC106603492
CCR4-NOT transcription complex subunit 7 isoform X2.
   
 
 0.647
cnot8
CCR4-NOT transcription complex subunit 8.
   
 
 0.647
LOC100196682
Wilms tumor 1 associated protein-like isoform X1.
   
  
 0.612
wtap
pre-mRNA-splicing regulator WTAP isoform X1.
   
  
 0.612
adar
Double-stranded RNA-specific adenosine deaminase.
      
 0.606
LOC100380651
Protein virilizer homolog.
    
 
 0.597
LOC106594281
RNA demethylase ALKBH5-like.
      
 0.593
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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