STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106601810Transducin beta-like protein 3. (871 aa)    
Predicted Functional Partners:
utp15
U3 small nucleolar RNA-associated protein 15 homolog.
  
0.998
wdr36
WD repeat-containing protein 36.
   
 0.998
nol6
Nucleolar protein 6.
   
 0.998
LOC106568368
WD repeat-containing protein 36-like.
   
 0.998
pwp2
Periodic tryptophan protein 2 homolog.
  
0.997
LOC106574871
Periodic tryptophan protein 2 homolog.
  
0.997
LOC106582083
WD repeat-containing protein 3-like.
  
0.997
wdr3
LOW QUALITY PROTEIN: WD repeat-containing protein 3.
   
 0.997
utp18
U3 small nucleolar RNA-associated protein 18 homolog.
   
 0.996
nop14
Nucleolar protein 14 isoform X1.
   
 0.996
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.