STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMEM100Transmembrane protein 100-like. (143 aa)    
Predicted Functional Partners:
ENSSSAP00000054469
Src homology 2 domain containing E.
   
    0.605
she
SH2 domain-containing adapter protein E.
   
    0.605
snx15
Sorting nexin-15.
      
 0.601
anks6
Ankyrin repeat and SAM domain-containing protein 6.
      
 0.593
INAFM2
Uncharacterized protein LOC106610873.
      
 0.475
LOC106562138
SH2 domain-containing adapter protein D-like isoform X2.
   
    0.467
LOC100196527
SH2 domain-containing adapter protein D.
   
    0.467
LOC106587230
SH2 domain-containing adapter protein F-like isoform X1.
   
    0.467
LOC106584413
SH2 domain-containing adapter protein F-like.
   
    0.467
LOC106570165
Coiled-coil domain-containing protein 106-like.
      
 0.463
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.