STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106605609TBC1 domain family member 15-like. (488 aa)    
Predicted Functional Partners:
LOC106606877
Uncharacterized protein LOC106606877.
   
 0.573
rab9a
Ras-related protein Rab-9A.
   
 0.573
LOC106601582
Armadillo repeat-containing protein 5-like.
   
 0.573
RAB9A
Ras-related protein Rab-9A-like.
   
 0.573
LOC106575287
Ras-related protein Rab-9A-like.
   
 0.573
LOC106612197
Ras-related protein Rab-9B-like.
   
 0.573
LOC106604244
Ras-related protein Rab-9B-like.
   
 0.573
LOC106574405
Ras-related protein Rab-9A-like.
   
 0.573
gbrap
Gamma-aminobutyric acid receptor-associated protein.
   
 0.545
gabarapl2
Gamma-aminobutyric acid receptor-associated protein-like 2.
   
 0.545
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.