STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106604360Coagulation factor VIII-like; Belongs to the multicopper oxidase family. (1741 aa)    
Predicted Functional Partners:
LOC106587117
Prothrombin; Thrombin, which cleaves bonds after Arg and Lys, converts fibrinogen to fibrin and activates factors V, VII, VIII, XIII, and, in complex with thrombomodulin, protein C. Functions in blood homeostasis, inflammation and wound healing; Belongs to the peptidase S1 family.
    
 0.924
LOC106561958
Prothrombin; Thrombin, which cleaves bonds after Arg and Lys, converts fibrinogen to fibrin and activates factors V, VII, VIII, XIII, and, in complex with thrombomodulin, protein C. Functions in blood homeostasis, inflammation and wound healing; Belongs to the peptidase S1 family.
    
 0.924
proc
Vitamin K-dependent protein C.
    
 0.850
lman1
Protein ERGIC-53 isoform X2.
    
 0.805
LOC106605118
Multiple coagulation factor deficiency protein 2 homolog isoform X1.
     
 0.768
mcfd2
Multiple coagulation factor deficiency protein 2 homolog.
     
 0.768
pros1
Vitamin K-dependent protein S.
   
 0.757
LOC106594202
Vitamin K-dependent protein S-like.
   
 0.757
LOC106571903
Platelet glycoprotein IX-like.
     
 0.701
gdn
Glia-derived nexin isoform X1; Belongs to the serpin family.
    
 0.699
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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