STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ppctPhosphatidylcholine transfer protein. (215 aa)    
Predicted Functional Partners:
acot13
Thioesterase superfamily member 2.
    
 
 0.640
star5
stAR-related lipid transfer protein 5-like.
   
  
 0.613
stard4
stAR-related lipid transfer protein 4.
      
 0.599
star3
StAR-related lipid transfer protein 3.
   
  
 0.563
LOC106601001
stAR-related lipid transfer protein 3-like isoform X1.
      
 0.562
ENSSSAP00000057452
StAR-related lipid transfer (START) domain containing 5.
      
 0.547
CD027
C4orf27 homolog.
      
 0.508
LOC106604145
PCTP-like protein.
      
0.491
LOC106612291
PCTP-like protein.
      
0.491
LOC106612160
Cytochrome C oxidase assembly protein COX11, mitochondrial.
      
 0.468
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.