STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSSAP00000004628Cathepsin L.1. (324 aa)    
Predicted Functional Partners:
ctsw
Cathepsin W isoform X1; Belongs to the peptidase C1 family.
  
0.564
ENSSSAP00000069818
Cathepsin F.
  
0.562
agt
Angiotensinogen precursor; Belongs to the serpin family.
    
 0.556
ctso
Cathepsin O precursor; Belongs to the peptidase C1 family.
  
0.540
catb
Cathepsin B precursor; Belongs to the peptidase C1 family.
  
0.532
LOC106611360
Cathepsin B-like; Belongs to the peptidase C1 family.
  
0.531
ctsb
Cathepsin B; Belongs to the peptidase C1 family.
  
0.531
lman1
Protein ERGIC-53 isoform X2.
     
 0.527
LOC106569716
Cathepsin Z-like; Belongs to the peptidase C1 family.
  
0.516
rs14
40S ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family.
   
 0.514
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.