STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC106604411Synaptonemal complex central element protein 3-like. (89 aa)    
Predicted Functional Partners:
syce1
Synaptonemal complex central element protein 1.
    
 0.991
ENSSSAP00000065185
Si:dkey-40g16.5.
    
 0.971
ENSSSAP00000081901
Si:dkey-40g16.5.
    
 0.971
ENSSSAP00000014187
annotation not available
    
 0.970
ENSSSAP00000014777
annotation not available
    
 0.970
LOC106601352
Synaptonemal complex central element protein 2-like.
    
 0.967
ENSSSAP00000044380
Synaptonemal complex central element protein 2-like.
    
 0.967
LOC106561293
Synaptonemal complex protein 3-like.
    
 0.918
LOC106583485
Synaptonemal complex protein 3-like isoform X1.
    
 0.918
sycp2l
Synaptonemal complex protein 2-like isoform X2.
    
 0.863
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.