STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rab10Ras-related protein Rab-10. (312 aa)    
Predicted Functional Partners:
LOC106561819
Guanine nucleotide exchange factor for Rab-3A-like isoform X4.
    
 0.860
LOC106584776
Guanine nucleotide exchange factor for Rab-3A-like isoform X1.
    
 0.860
LOC106609608
Exocyst complex component 4-like isoform X1.
    
 0.829
rilpl2
RILP-like protein 2 isoform X2.
   
 
 0.767
LOC106580358
RILP-like protein 2 isoform X1.
   
 
 0.767
EXOC1
Exocyst complex component 1-like isoform X1.
   
 0.753
exoc1
Exocyst complex component 1 isoform X1.
   
 0.753
exoc2
Exocyst complex component 2; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane. Belongs to the SEC5 family.
    
 0.748
EXOC2
Exocyst complex component 2.
    
 0.748
LOC106593771
Exocyst complex component 5.
   
 0.745
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.