STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106610470Rho GTPase-activating protein 7-like isoform X2. (1291 aa)    
Predicted Functional Partners:
LOC106565231
Tensin-2-like isoform X1.
    
 
 0.568
LOC100380686
Tensin-2 isoform X1.
    
 
 0.568
LOC106572749
Tensin-2-like isoform X3.
    
 
 0.568
LOC106580138
Ras GTPase-activating protein 1-like isoform X3.
    
 
 0.561
LOC106585767
Ras GTPase-activating protein 1-like isoform X4.
    
 
 0.561
LOC106572042
Transforming protein RhoA-like isoform X1.
   
 0.535
rnd3
Rho-related GTP-binding protein RhoE.
   
 0.535
RND1
Rho-related GTP-binding protein Rho6-like.
   
 0.535
LOC106572699
Rho-related GTP-binding protein Rho6.
   
 0.535
LOC106607565
Rho-related GTP-binding protein RhoB-like.
   
 0.535
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.