STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ttll5Tubulin polyglutamylase TTLL5 isoform X4. (1320 aa)    
Predicted Functional Partners:
dcp2
m7GpppN-mRNA hydrolase isoform X1.
    
 
 0.746
tpgs1
Tubulin polyglutamylase complex subunit 1.
    
 0.631
LOC106561601
Structural maintenance of chromosomes protein.
   
 
 0.617
atat1
Alpha-tubulin N-acetyltransferase 1; Specifically acetylates 'Lys-40' in alpha-tubulin on the lumenal side of microtubules. Promotes microtubule destabilization and accelerates microtubule dynamics; this activity may be independent of acetylation activity. Acetylates alpha-tubulin with a slow enzymatic rate, due to a catalytic site that is not optimized for acetyl transfer. Enters the microtubule through each end and diffuses quickly throughout the lumen of microtubules. Acetylates only long/old microtubules because of its slow acetylation rate since it does not have time to act on dyn [...]
   
  
 0.612
wdr90
WD repeat-containing protein 90.
    
 
 0.602
iqcg
IQ domain-containing protein G.
      
 0.601
ttll9
Probable tubulin polyglutamylase TTLL9 isoform X1.
      
0.596
ENSSSAP00000010089
annotation not available
    
 
 0.595
LOC106595781
mRNA-decapping enzyme 1B-like.
    
 
 0.595
LOC106571976
mRNA-decapping enzyme 1A-like isoform X1.
    
 
 0.595
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.