STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106604436Lysosome-associated membrane glycoprotein 2-like isoform X1. (406 aa)    
Predicted Functional Partners:
LOC106586760
Lysosome-associated membrane glycoprotein 1-like.
  
 
0.942
LOC106592791
Lysosome-associated membrane glycoprotein 1-like.
   
 
0.940
LAMP1
Lysosomal-associated membrane protein 1 precursor.
   
 
0.940
LOC106581974
Lysosome-associated membrane glycoprotein 1-like.
   
 
0.940
LOC106567183
Tetraspanin.
    
 0.851
cd63
Tetraspanin.
    
 0.851
LOC106580528
Tetraspanin.
    
 0.826
kptn
Kaptin.
    
 
 0.666
LOC106588110
Regulatory-associated protein of mTOR isoform X2.
    
 
 0.656
LOC106564921
Regulatory-associated protein of mTOR-like isoform X3.
    
 
 0.656
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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