Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC106604436Lysosome-associated membrane glycoprotein 2-like isoform X1. (406 aa)    
Predicted Functional Partners:
LOC106586760
Lysosome-associated membrane glycoprotein 1-like.
   
  0.969
LOC106581974
Lysosome-associated membrane glycoprotein 1-like.
   
  0.969
LOC106592791
Lysosome-associated membrane glycoprotein 1-like.
   
  0.904
LAMP1
Lysosomal-associated membrane protein 1 precursor.
   
  0.904
LOC106569800
Golgi reassembly-stacking protein 1-like isoform X1.
    
 0.861
LOC106563098
Golgi reassembly-stacking protein 1-like.
    
 0.861
LOC106567183
Tetraspanin.
   
 0.845
cd63
Tetraspanin.
   
 0.845
cd68
Macrosialin precursor.
     
 0.834
LOC106569506
Golgi reassembly-stacking protein 2-like isoform X2.
    
  0.797
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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