STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106591002Probable ergosterol biosynthetic protein 28. (220 aa)    
Predicted Functional Partners:
sigmar1
Sigma non-opioid intracellular receptor 1.
   
 
 0.986
fdft1
Squalene synthase isoform X1.
   
 
 0.986
peam3
Phosphoethanolamine N-methyltransferase 3.
    
 
 0.985
LOC106570209
Lanosterol 14-alpha demethylase-like; Belongs to the cytochrome P450 family.
   
 
 0.973
LOC106588568
Lanosterol 14-alpha demethylase isoform X1; Belongs to the cytochrome P450 family.
   
 
 0.973
ENSSSAP00000027250
Hydroxysteroid (17-beta) dehydrogenase 7.
   
 
 0.950
HSD17B7
Hydroxysteroid 17-beta dehydrogenase 7.
   
 
 0.950
LOC106568727
3-keto-steroid reductase-like isoform X1.
   
 
 0.950
ENSSSAP00000024887
sterol-C5-desaturase.
   
 
 0.948
sc5d
Lathosterol oxidase; Belongs to the sterol desaturase family.
   
 
 0.948
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.