STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106609248Probable G protein-coupled receptor 85. (377 aa)    
Predicted Functional Partners:
ENSSSAP00000018069
FIC domain containing.
      
 0.734
ficd
Adenosine monophosphate-protein transferase FICD.
      
 0.734
LOC106566425
Zinc finger protein PLAGL2-like isoform X1.
      
 0.720
plagl2
Zinc finger protein PLAGL2.
      
 0.720
ptchd1
Patched domain-containing protein 1.
      
 0.703
LOC106603528
Receptor-interacting serine/threonine-protein kinase 4-like.
    
 0.695
RIPK4
Receptor-interacting serine/threonine-protein kinase 4-like.
    
 0.695
Ptchd1
Patched domain containing 1.
      
 0.693
ENSSSAP00000086965
Ectodermal-neural cortex 1.
    
 0.658
ENC1
Ectoderm-neural cortex protein 1-like isoform X2.
    
 0.658
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.