STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106601010Synaptonemal complex protein SC65-like. (475 aa)    
Predicted Functional Partners:
ppib
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
   
 0.899
PPIC
Peptidylprolyl isomerase C.
   
 0.810
LOC106580199
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
   
 0.810
LOC106605089
Prolyl 3-hydroxylase 3-like.
   
0.755
P3h1
Procollagen-proline 3-dioxygenase 1.
   
0.755
LOC106573995
Prolyl 3-hydroxylase 2-like.
   
0.755
LOC106613518
Prolyl 3-hydroxylase 2-like.
   
0.755
LOC106583419
Prolyl 3-hydroxylase 3-like.
   
0.755
P3H1
Prolyl 3-hydroxylase 1-like.
   
0.755
LOC106591797
Protein disulfide-isomerase.
   
 
 0.610
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.