STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UNC13BProtein unc-13 homolog B-like isoform X20. (3538 aa)    
Predicted Functional Partners:
LOC106570772
Regulating synaptic membrane exocytosis protein 2-like.
    
 0.993
LOC106605391
Regulating synaptic membrane exocytosis protein 2-like isoform X11.
    
0.993
RIMS2
Regulating synaptic membrane exocytosis protein 2-like isoform X5.
    
0.993
LOC106574738
Peripheral plasma membrane protein CASK-like.
   
 
 0.690
ENSSSAP00000105696
Calcium/calmodulin-dependent serine protein kinase b.
   
 
 0.690
cask
Peripheral plasma membrane protein CASK isoform X10; Belongs to the MAGUK family.
   
 
 0.690
CASK
Peripheral plasma membrane protein CASK-like isoform X11; Belongs to the MAGUK family.
   
 
 0.690
LOC106611384
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 0.685
ENSSSAP00000090481
annotation not available
   
 0.685
LOC106588706
Regulating synaptic membrane exocytosis protein 1-like.
    
0.668
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.