STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cenpfCentromere protein F. (2667 aa)    
Predicted Functional Partners:
LOC106607702
Mitotic checkpoint serine/threonine-protein kinase BUB1-like.
   
 
 0.973
LOC106582108
Mitotic checkpoint serine/threonine-protein kinase BUB1 beta-like.
   
 
 0.960
cenpe
Centromere-associated protein E isoform X3; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
 
 0.960
ENSSSAP00000047040
annotation not available
   
 
 0.957
LOC106560548
Abnormal spindle-like microcephaly-associated protein homolog.
   
  
 0.952
ENSSSAP00000105940
Extra spindle pole bodies like 1, separase.
   
 
 0.952
LOC106605052
Dual specificity protein kinase Ttk-like isoform X1.
   
  
 0.933
LOC106583830
Dual specificity protein kinase Ttk-like isoform X2.
   
  
 0.933
ENSSSAP00000030173
annotation not available
   
  
 0.924
cdc20b
Cell division cycle protein 20 homolog B isoform X1.
   
 
 0.912
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.