STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106607600Adenosine 3'-phospho 5'-phosphosulfate transporter 1-like isoform X2. (434 aa)    
Predicted Functional Partners:
rbm25
RNA-binding protein 25 isoform X2.
      
 0.774
LOC100136940
Long wave-sensitive opsin isoform X1.
      
 0.723
b3gat3
Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase; Belongs to the glycosyltransferase 43 family.
   
 
 0.644
ENSSSAP00000058164
Retinoic acid receptor RXR-gamma-B-like.
   
  
 0.641
LOC106571666
Gephyrin.
  
  
 0.637
GPHN
Gephyrin-like isoform X5.
  
  
 0.636
EXT2
Exostosin-2; Belongs to the glycosyltransferase 47 family.
   
  
 0.632
LOC106593828
Translocation protein SEC63 homolog isoform X2.
    
 
 0.602
LOC106566455
Solute carrier family 35 member C2-like.
      
 0.601
LOC106560710
UDP-N-acetylglucosamine/UDP-glucose/GDP-mannose transporter-like.
   
  
 0.600
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.