STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106604508T-cell surface glycoprotein CD8 beta chain-like. (173 aa)    
Predicted Functional Partners:
ENSSSAP00000012446
annotation not available
  
     0.518
ENSSSAP00000017373
Osteocalcin-like.
  
     0.487
LOC106586898
Uncharacterized protein LOC106586898.
  
     0.487
ENSSSAP00000040073
annotation not available
  
     0.486
ENSSSAP00000079851
annotation not available
  
     0.478
LOC106580635
Uncharacterized protein LOC106580635.
  
     0.473
LOC106605302
Uncharacterized protein LOC106605302.
  
     0.470
ENSSSAP00000048721
annotation not available
  
     0.462
ENSSSAP00000048205
annotation not available
  
     0.458
ENSSSAP00000017105
annotation not available
  
     0.445
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.