STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
f8a1Factor VIII intron 22 protein-like isoform X1. (317 aa)    
Predicted Functional Partners:
LOC106596941
Huntingtin-like isoform X2.
    
 
 0.926
appl1
DCC-interacting protein 13-alpha isoform X2.
      
 0.574
APPL2
DCC-interacting protein 13-beta-like.
      
 0.574
LOC106560977
DCC-interacting protein 13-beta-like.
      
 0.574
LOC106582615
DCC-interacting protein 13-alpha-like isoform X2.
      
 0.574
alg9
Mannosyltransferase.
    
 
 0.401
LOC106599625
Arginine transport ATP-binding protein ArtM-like.
    
 
 0.401
ENSSSAP00000034021
annotation not available
    
 
 0.401
ENSSSAP00000034049
annotation not available
    
 
 0.401
LOC106599019
Multidrug resistance protein 1-like.
    
 
 0.401
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.