STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106610877Kelch-like protein 28. (597 aa)    
Predicted Functional Partners:
bbs7
Bardet-Biedl syndrome 7 protein homolog; The BBSome complex is thought to function as a coat complex required for sorting of specific membrane proteins to the primary cilia. The BBSome complex is required for ciliogenesis but is dispensable for centriolar satellite function.
   
 0.789
LOC106611037
Tetratricopeptide repeat protein 8-like isoform X1.
    
 0.710
LOC106591546
Tetratricopeptide repeat protein 8-like isoform X1.
    
 0.710
bbs9
Protein PTHB1 isoform X1.
    
 0.688
ENSSSAP00000061924
annotation not available
    
 0.688
ENSSSAP00000061927
annotation not available
    
 0.688
LOC100194694
Uncharacterized protein LOC100194694.
    
 0.673
sqstm
Sequestosome-1.
    
 0.673
ENSSSAP00000056455
annotation not available
    
 0.640
ENSSSAP00000058739
Bardet-Biedl syndrome 4 protein-like.
    
 0.640
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
Server load: low (16%) [HD]