STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hao1Hydroxyacid oxidase 1. (434 aa)    
Predicted Functional Partners:
Agxt
Alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase.
  
 0.981
LOC106574201
Serine--pyruvate aminotransferase-like.
  
 0.973
LOC106564824
Catalase; Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide.
   
 
 0.953
LOC106592840
Glyoxylate reductase/hydroxypyruvate reductase-like isoform X1; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
  
 
 0.942
GRHPR
Glyoxylate reductase/hydroxypyruvate reductase-like; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
  
 
 0.942
grhpr
Glyoxylate reductase/hydroxypyruvate reductase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
  
 
 0.942
hoga1
4-hydroxy-2-oxoglutarate aldolase, mitochondrial; Belongs to the DapA family.
   
 
 0.929
LOC106586602
Hydroxyacid oxidase 2-like isoform X2.
  
  
0.905
haox2
Hydroxyacid oxidase 2 isoform X2.
  
  
 
0.902
erg19
Diphosphomevalonate decarboxylase; Performs the first committed step in the biosynthesis of isoprenes.
    
 0.895
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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