STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSSAP00000004886Myeloid-derived growth factor-like. (95 aa)    
Predicted Functional Partners:
ssrd
Translocon-associated protein subunit delta precursor.
   
  
 0.657
LOC106567025
Translocon-associated protein subunit delta-like.
   
  
 0.657
LOC106613672
Coatomer subunit epsilon; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. The coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. Belongs to the COPE family.
   
  
 0.560
LOC106573830
Coatomer subunit epsilon; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. The coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. Belongs to the COPE family.
   
  
 0.560
ENSSSAP00000006836
Thioredoxin domain-containing protein 11-like.
   
  
 0.488
LOC106585183
Thioredoxin domain-containing protein 11-like.
   
  
 0.488
LOC106609106
Cysteine-rich with EGF-like domain protein 2 isoform X3.
   
  
 0.479
LOC106575997
Cysteine-rich with EGF-like domain protein 2 isoform X1.
   
  
 0.479
yars1
Tyrosine--tRNA ligase.
   
  
 0.455
ENSSSAP00000086864
X-box binding protein 1.
   
 
  0.449
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.