mapk8ip3 protein (Salmo salar) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

mapk8ip3

C-Jun-amino-terminal kinase-interacting protein 3 isoform X6. (1356 aa)

Predicted Functional Partners:

map2k4

0.934

LOC106589490

0.934

LOC106560362

0.931

mapk8

0.931

mapk10

0.931

LOC106579004

0.931

LOC106589346

0.931

LOC106604910

0.930

LOC106562896

0.914

LOC106608687

0.913

Your Current Organism:

Salmo salar

NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC106560362	LOC106562896	ENSSSAP00000001029	ENSSSAP00000009307	Mitogen-activated protein kinase.	Mitogen-activated protein kinase kinase kinase 1-like isoform X2.	0.965
LOC106560362	LOC106589490	ENSSSAP00000001029	ENSSSAP00000079126	Mitogen-activated protein kinase.	Dual specificity mitogen-activated protein kinase kinase 4-like isoform X1; Belongs to the protein kinase superfamily.	0.988
LOC106560362	LOC106604910	ENSSSAP00000001029	ENSSSAP00000059694	Mitogen-activated protein kinase.	Mitogen-activated protein kinase.	0.907
LOC106560362	map2k4	ENSSSAP00000001029	ENSSSAP00000051754	Mitogen-activated protein kinase.	Dual specificity mitogen-activated protein kinase kinase 4 isoform X2; Belongs to the protein kinase superfamily.	0.988
LOC106560362	mapk8ip3	ENSSSAP00000001029	ENSSSAP00000004908	Mitogen-activated protein kinase.	C-Jun-amino-terminal kinase-interacting protein 3 isoform X6.	0.931
LOC106562896	LOC106560362	ENSSSAP00000009307	ENSSSAP00000001029	Mitogen-activated protein kinase kinase kinase 1-like isoform X2.	Mitogen-activated protein kinase.	0.965
LOC106562896	LOC106579004	ENSSSAP00000009307	ENSSSAP00000074575	Mitogen-activated protein kinase kinase kinase 1-like isoform X2.	Mitogen-activated protein kinase.	0.965
LOC106562896	LOC106589346	ENSSSAP00000009307	ENSSSAP00000115793	Mitogen-activated protein kinase kinase kinase 1-like isoform X2.	Mitogen-activated protein kinase.	0.965
LOC106562896	LOC106589490	ENSSSAP00000009307	ENSSSAP00000079126	Mitogen-activated protein kinase kinase kinase 1-like isoform X2.	Dual specificity mitogen-activated protein kinase kinase 4-like isoform X1; Belongs to the protein kinase superfamily.	0.991
LOC106562896	LOC106604910	ENSSSAP00000009307	ENSSSAP00000059694	Mitogen-activated protein kinase kinase kinase 1-like isoform X2.	Mitogen-activated protein kinase.	0.957
LOC106562896	map2k4	ENSSSAP00000009307	ENSSSAP00000051754	Mitogen-activated protein kinase kinase kinase 1-like isoform X2.	Dual specificity mitogen-activated protein kinase kinase 4 isoform X2; Belongs to the protein kinase superfamily.	0.991
LOC106562896	mapk10	ENSSSAP00000009307	ENSSSAP00000057910	Mitogen-activated protein kinase kinase kinase 1-like isoform X2.	Mitogen-activated protein kinase.	0.965
LOC106562896	mapk8	ENSSSAP00000009307	ENSSSAP00000001404	Mitogen-activated protein kinase kinase kinase 1-like isoform X2.	Mitogen-activated protein kinase.	0.965
LOC106562896	mapk8ip3	ENSSSAP00000009307	ENSSSAP00000004908	Mitogen-activated protein kinase kinase kinase 1-like isoform X2.	C-Jun-amino-terminal kinase-interacting protein 3 isoform X6.	0.914
LOC106579004	LOC106562896	ENSSSAP00000074575	ENSSSAP00000009307	Mitogen-activated protein kinase.	Mitogen-activated protein kinase kinase kinase 1-like isoform X2.	0.965
LOC106579004	LOC106589490	ENSSSAP00000074575	ENSSSAP00000079126	Mitogen-activated protein kinase.	Dual specificity mitogen-activated protein kinase kinase 4-like isoform X1; Belongs to the protein kinase superfamily.	0.988
LOC106579004	LOC106604910	ENSSSAP00000074575	ENSSSAP00000059694	Mitogen-activated protein kinase.	Mitogen-activated protein kinase.	0.907
LOC106579004	map2k4	ENSSSAP00000074575	ENSSSAP00000051754	Mitogen-activated protein kinase.	Dual specificity mitogen-activated protein kinase kinase 4 isoform X2; Belongs to the protein kinase superfamily.	0.987
LOC106579004	mapk8ip3	ENSSSAP00000074575	ENSSSAP00000004908	Mitogen-activated protein kinase.	C-Jun-amino-terminal kinase-interacting protein 3 isoform X6.	0.931
LOC106589346	LOC106562896	ENSSSAP00000115793	ENSSSAP00000009307	Mitogen-activated protein kinase.	Mitogen-activated protein kinase kinase kinase 1-like isoform X2.	0.965