STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSSAP00000004923annotation not available (144 aa)    
Predicted Functional Partners:
LOC106587016
Glutamate receptor ionotropic, NMDA 1-like isoform X2.
   
 0.852
LOC106563238
Glutamate receptor ionotropic, NMDA 1 isoform X11.
   
 0.852
LOC106565473
Glutamate receptor ionotropic, NMDA 1-like isoform X2.
   
 0.852
LOC106574738
Peripheral plasma membrane protein CASK-like.
   
 0.842
ENSSSAP00000105696
Calcium/calmodulin-dependent serine protein kinase b.
   
 0.842
cask
Peripheral plasma membrane protein CASK isoform X10; Belongs to the MAGUK family.
   
 0.842
CASK
Peripheral plasma membrane protein CASK-like isoform X11; Belongs to the MAGUK family.
   
 0.842
LOC106572512
Glutamate receptor ionotropic, NMDA 3A-like.
    
 0.569
GRIN3A
Glutamate ionotropic receptor NMDA type subunit 3A.
    
 0.569
ENSSSAP00000094950
annotation not available
    
 0.569
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.