STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CRLS1Cardiolipin synthetase. (123 aa)    
Predicted Functional Partners:
LOC106563023
Phosphatidylserine decarboxylase proenzyme-like.
   
 0.959
pisd
Phosphatidylserine decarboxylase proenzyme, mitochondrial; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer). Plays a central role in phospholipid metabolism and in the interorganelle trafficking of phosphatidylserine.
   
 0.959
dolk
Dolichol kinase isoform X1.
   
 
 0.902
LOC106585948
Phosphatidate cytidylyltransferase; Belongs to the CDS family.
   
 0.850
ENSSSAP00000099959
CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 1.
   
 0.850
LOC106580500
Phosphatidate cytidylyltransferase; Provides CDP-diacylglycerol, an important precursor for the synthesis of phosphatidylinositol, phosphatidylglycerol, and cardiolipin.
   
 0.850
ENSSSAP00000116791
Phosphatidate cytidylyltransferase 2-like.
   
 0.850
serb
Phosphoserine phosphatase.
  
 
 0.849
LOC106612829
Phosphoserine phosphatase-like.
  
 
 0.849
LOC106608867
Phosphatidylinositol 3-kinase catalytic subunit type 3.
   
 
 0.810
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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