STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSSAP00000004946Phosphodiesterase 6H, cGMP-specific, cone, gamma, paralog a. (73 aa)    
Predicted Functional Partners:
LOC106578975
Phosphodiesterase.
   
 
 0.590
LOC106589370
Phosphodiesterase.
   
 
 0.590
LOC106611797
arrestin-C-like.
   
  
 0.477
LOC106604735
arrestin-C-like isoform X2.
   
  
 0.477
LOC106563547
Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta-like.
   
 
 0.446
LOC106568151
Phosphodiesterase.
   
 
 0.446
pde6a
Phosphodiesterase.
   
 
 0.442
ENSSSAP00000040205
Phosphodiesterase 6A, cGMP-specific, rod, alpha.
   
 
 0.442
LOC106578596
Melanocortin receptor 4-like.
  
 
   0.422
mgp
Matrix Gla protein isoform X1.
      
 0.420
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.