STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106591465Transmembrane emp24 domain-containing protein 10-like. (214 aa)    
Predicted Functional Partners:
tmed2
Transmembrane emp24 domain-containing protein 2 isoform X1.
   
0.983
tmed2-2
Transmembrane emp24 domain-containing protein 2 isoform X1.
   
0.983
LOC106562632
Transmembrane emp24 domain-containing protein 2-like isoform X1.
   
0.983
LOC106604203
Transmembrane emp24 domain-containing protein 9-like.
   
0.937
ENSSSAP00000047483
Transmembrane p24 trafficking protein 4.
   
0.937
tmed9
Transmembrane emp24 domain-containing protein 9 precursor.
   
0.937
LOC106572840
Transmembrane emp24 domain-containing protein 4-like.
   
0.937
pgap1
GPI inositol-deacylase; Involved in inositol deacylation of GPI-anchored proteins. GPI inositol deacylation may important for efficient transport of GPI- anchored proteins from the endoplasmic reticulum to the Golgi.
    
 
 0.928
LOC106604974
Transmembrane emp24 domain-containing protein 11-like.
   
0.927
ENSSSAP00000068642
annotation not available
   
 0.927
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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