STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
erp27Endoplasmic reticulum resident protein ERp27 precursor. (256 aa)    
Predicted Functional Partners:
gak
cyclin-G-associated kinase isoform X1.
    
 0.836
LOC106605095
Calsyntenin-3-like isoform X1.
      
 0.741
LOC106583354
Calsyntenin-3-like.
      
 0.741
LOC106610664
Peptide methionine sulfoxide reductase MsrA 1-like.
   
 0.702
msra
Peptide methionine sulfoxide reductase.
   
 0.702
LOC106571446
Mitochondrial peptide methionine sulfoxide reductase-like.
   
 0.702
LOC106567149
78 kDa glucose-regulated protein-like; Belongs to the heat shock protein 70 family.
  
 0.686
grp78
78 kDa glucose-regulated protein precursor; Belongs to the heat shock protein 70 family.
  
 0.686
LOC106563481
Peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Prx5 subfamily.
   
 0.658
LOC106603145
Peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Prx5 subfamily.
   
 0.658
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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