STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fgl1Fibrinogen-like protein 1. (303 aa)    
Predicted Functional Partners:
LOC106609923
Fibrinogen gamma chain-like.
   
   
0.673
LOC106605731
Uncharacterized LOC106605731.
    
 0.602
apoh
Beta-2-glycoprotein 1 precursor.
   
 0.598
APOH
Beta-2-glycoprotein 1-like isoform X2.
   
 0.598
APOH-2
Beta-2-glycoprotein 1-like.
   
 0.598
kansl2
KAT8 regulatory NSL complex subunit 2.
    
 0.534
cd302
CD302 antigen.
   
 0.505
LOC106586182
CD302 antigen-like isoform X1.
   
 0.505
LOC106608433
Fibrinogen alpha chain-like.
   
  
0.494
LOC106578169
Fibrinogen alpha chain-like.
   
  
 0.494
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.