STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106609439Poly [ADP-ribose] polymerase 12-like. (681 aa)    
Predicted Functional Partners:
rig-I
Retinoic acid-inducible gene-I.
   
 
 0.621
ifih1
Interferon-induced helicase C domain-containing protein 1 isoform X1.
   
 
 0.482
exosc5
Exosome complex component RRP46 isoform X1.
    
 
 0.444
tep1
Telomerase protein component 1.
      
 0.435
exosc7
Exosome complex exonuclease RRP42.
    
 
 0.428
cmpk2
Thymidylate kinase.
  
  
 0.415
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.