STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106603182B9 domain-containing protein 2-like. (175 aa)    
Predicted Functional Partners:
b9d1
B9 domain-containing protein 1.
   
 0.992
mks1
Meckel syndrome type 1 protein.
    
0.944
cc2d2a
Coiled-coil and C2 domain-containing protein 2A isoform X1.
    
 0.937
tctn1
Tectonic-1 isoform X1.
    
 0.934
LOC106579062
Tectonic-3-like isoform X1.
    
 0.930
ahi1
Jouberin isoform X1.
    
 0.907
tmem231
Transmembrane protein 231.
   
 
 0.903
tmem67
Meckelin isoform X1.
     
 0.862
ENSSSAP00000046401
annotation not available
     
 0.862
TMEM216
Transmembrane protein 216.
     
 0.859
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.