STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106601816Leucine-rich repeat-containing protein 48-like isoform X1. (425 aa)    
Predicted Functional Partners:
LOC106571115
Adenylate kinase 7-like isoform X1.
  
 
 0.739
ak7
Adenylate kinase 7.
  
 
 0.737
ccdc40
Coiled-coil domain-containing protein 40.
   
 
 0.725
LOC106603090
Radial spoke head protein 6 homolog A-like.
   
 
 0.723
LOC106563409
Radial spoke head protein 6 homolog A-like isoform X1.
   
 
 0.723
drc7
Dynein regulatory complex subunit 7 isoform X1.
  
  
 0.649
iqcg
IQ domain-containing protein G.
  
  
 0.645
LOC106608489
L-rhamnose-binding lectin CSL1 isoform X2.
    
   0.638
LOC106605779
L-rhamnose-binding lectin CSL2-like.
    
   0.638
LOC106596447
Latrophilin-3-like.
    
   0.638
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.