Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC106601816Leucine-rich repeat-containing protein 48-like isoform X1. (425 aa)    
Predicted Functional Partners:
drc7
Dynein regulatory complex subunit 7 isoform X1.
  
 
 0.923
iqcg
IQ domain-containing protein G.
  
 
 0.916
drc1
Dynein regulatory complex protein 1.
   
 
 0.913
ccdc65
Coiled-coil domain-containing protein 65.
   
 
 0.909
ENSSSAP00000049798
annotation not available
  
 
 0.907
gas8
Growth arrest-specific protein 8 isoform X1.
   
 
 0.888
tcte1
T-complex-associated testis-expressed protein 1.
    
 
 0.887
cfap43
Cilia- and flagella-associated protein 43 isoform X1.
   
 
 0.880
cfap58
Cilia- and flagella-associated protein 58.
   
 0.843
cfap44
Cilia- and flagella-associated protein 44.
   
 
 0.820
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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