GCF protein (Salmo salar) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

Coexpression

Experiments

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Textmining

[Homology]

Score

GCF

GC-rich sequence DNA-binding factor. (566 aa)

Predicted Functional Partners:

tfip11

0.914

DHX15

0.779

LOC106609999

0.779

ENSSSAP00000070804

0.779

LOC106577609

0.779

syf2

0.749

LOC106610898

0.749

cdc40

0.732

LOC106571808

0.732

RSRC1

0.688

Your Current Organism:

Salmo salar

NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DHX15	GCF	ENSSSAP00000037477	ENSSSAP00000005022	pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 isoform X1.	GC-rich sequence DNA-binding factor.	0.779
DHX15	LOC106571808	ENSSSAP00000037477	ENSSSAP00000058553	pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 isoform X1.	pre-mRNA-processing factor 17-like.	0.971
DHX15	LOC106577609	ENSSSAP00000037477	ENSSSAP00000086631	pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 isoform X1.	pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15-like.	0.900
DHX15	LOC106610898	ENSSSAP00000037477	ENSSSAP00000073796	pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 isoform X1.	pre-mRNA-splicing factor syf2-like isoform X1.	0.947
DHX15	cdc40	ENSSSAP00000037477	ENSSSAP00000006031	pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 isoform X1.	pre-mRNA-processing factor 17.	0.971
DHX15	syf2	ENSSSAP00000037477	ENSSSAP00000007099	pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 isoform X1.	Pre-mRNA-splicing factor SYF2.	0.947
DHX15	tfip11	ENSSSAP00000037477	ENSSSAP00000100078	pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 isoform X1.	Tuftelin-interacting protein 11; Involved in pre-mRNA splicing, specifically in spliceosome disassembly during late-stage splicing events. Belongs to the TFP11/STIP family.	0.987
ENSSSAP00000070804	GCF	ENSSSAP00000070804	ENSSSAP00000005022	DEAH (Asp-Glu-Ala-His) box helicase 15.	GC-rich sequence DNA-binding factor.	0.779
ENSSSAP00000070804	LOC106571808	ENSSSAP00000070804	ENSSSAP00000058553	DEAH (Asp-Glu-Ala-His) box helicase 15.	pre-mRNA-processing factor 17-like.	0.971
ENSSSAP00000070804	LOC106610898	ENSSSAP00000070804	ENSSSAP00000073796	DEAH (Asp-Glu-Ala-His) box helicase 15.	pre-mRNA-splicing factor syf2-like isoform X1.	0.947
ENSSSAP00000070804	cdc40	ENSSSAP00000070804	ENSSSAP00000006031	DEAH (Asp-Glu-Ala-His) box helicase 15.	pre-mRNA-processing factor 17.	0.971
ENSSSAP00000070804	syf2	ENSSSAP00000070804	ENSSSAP00000007099	DEAH (Asp-Glu-Ala-His) box helicase 15.	Pre-mRNA-splicing factor SYF2.	0.947
ENSSSAP00000070804	tfip11	ENSSSAP00000070804	ENSSSAP00000100078	DEAH (Asp-Glu-Ala-His) box helicase 15.	Tuftelin-interacting protein 11; Involved in pre-mRNA splicing, specifically in spliceosome disassembly during late-stage splicing events. Belongs to the TFP11/STIP family.	0.987
GCF	DHX15	ENSSSAP00000005022	ENSSSAP00000037477	GC-rich sequence DNA-binding factor.	pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 isoform X1.	0.779
GCF	ENSSSAP00000070804	ENSSSAP00000005022	ENSSSAP00000070804	GC-rich sequence DNA-binding factor.	DEAH (Asp-Glu-Ala-His) box helicase 15.	0.779
GCF	LOC106571808	ENSSSAP00000005022	ENSSSAP00000058553	GC-rich sequence DNA-binding factor.	pre-mRNA-processing factor 17-like.	0.732
GCF	LOC106577609	ENSSSAP00000005022	ENSSSAP00000086631	GC-rich sequence DNA-binding factor.	pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15-like.	0.779
GCF	LOC106609999	ENSSSAP00000005022	ENSSSAP00000070008	GC-rich sequence DNA-binding factor.	Microsomal triglyceride transfer protein large subunit-like.	0.779
GCF	LOC106610898	ENSSSAP00000005022	ENSSSAP00000073796	GC-rich sequence DNA-binding factor.	pre-mRNA-splicing factor syf2-like isoform X1.	0.749
GCF	RSRC1	ENSSSAP00000005022	ENSSSAP00000068407	GC-rich sequence DNA-binding factor.	Arginine/serine-rich coiled-coil protein 1.	0.688