STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pgam5Serine/threonine-protein phosphatase PGAM5, mitochondrial precursor. (302 aa)    
Predicted Functional Partners:
LOC106575622
FUN14 domain-containing protein 1-like isoform X1.
     
 0.964
fundc1
FUN14 domain-containing protein 1.
     
 0.964
LOC106586791
FUN14 domain-containing protein 1-like.
     
 0.964
mlkl
Mixed lineage kinase domain-like protein.
    
 0.939
LOC106584536
Mixed lineage kinase domain-like protein.
    
 0.939
LOC106572112
Bcl-2-like protein 1.
    
 0.936
LOC106565774
Apoptosis regulator Bcl-X.
    
 0.936
bclx
Apoptosis regulator Bcl-X isoform X1.
    
 0.936
BCL2L1
Bcl-2-like protein 1.
    
 0.936
DNM1L
Dynamin-1-like protein isoform X1; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
    
 0.932
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.