STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106610400Myotubularin-related protein 7-like. (110 aa)    
Predicted Functional Partners:
LOC106578739
Myotubularin-related protein 9-like isoform X1.
   
 0.907
ENSSSAP00000072939
Zgc:154055.
   
 0.907
LOC106609604
Leucine-rich repeat and guanylate kinase domain-containing protein-like.
   
 
 0.626
cfap74
Cilia- and flagella-associated protein 74 isoform X2.
    
 
 0.496
cfap69
Cilia- and flagella-associated protein 69 isoform X1.
    
   0.481
ENSSSAP00000057187
annotation not available
    
   0.481
synj1
Synaptojanin-1.
   
 0.470
synj1-2
Synaptojanin-1 isoform X7.
   
 0.470
LOC106603952
Myotubularin-related protein 4-like.
    
 0.464
ENSSSAP00000071182
annotation not available
    
 0.464
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.