STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
runx2Runt-related transcription factor 2. (319 aa)    
Predicted Functional Partners:
LOC106560844
Core-binding factor subunit beta-like.
    
 0.913
LOC106573726
Core-binding factor subunit beta isoform X1.
    
 0.913
bglap
Osteocalcin precursor.
    
 0.799
mysm1
Histone H2A deubiquitinase MYSM1.
    
  0.763
LOC106613979
Histone H2A deubiquitinase MYSM1-like.
    
  0.763
bmp2
Bone morphogenetic protein 2 precursor.
   
 
 0.761
LOC106611121
Bone morphogenetic protein 4-like.
   
 
 0.728
bmp4
Bone morphogenetic protein 4 precursor.
   
 
 0.728
twist2
Twist-related protein 2.
    
 0.709
LOC106586121
Twist-related protein 2-like.
    
 0.709
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.