STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106608595Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties. (854 aa)    
Predicted Functional Partners:
gbe1
1,4-alpha-glucan-branching enzyme.
  
 0.997
LOC106578509
Glycogen debranching enzyme-like isoform X1.
  
 0.993
LOC106599117
Glycogen debranching enzyme-like isoform X2.
  
 0.992
LOC106568905
Glycogen debranching enzyme-like isoform X1.
  
 0.992
LOC100136478
Alpha-amylase.
  
 0.963
LOC106578483
Alpha-amylase.
  
 0.963
pgm1
Phosphoglucomutase 1; Belongs to the phosphohexose mutase family.
  
 
 0.963
pgm2l1
Glucose 1,6-bisphosphate synthase.
  
 
 0.961
ugpa
UTP--glucose-1-phosphate uridylyltransferase.
   
 
 0.959
PGM1
Phosphoglucomutase-1-like; Belongs to the phosphohexose mutase family.
  
 
 0.956
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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