STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSSAP00000005161annotation not available (637 aa)    
Predicted Functional Partners:
LOC106612458
Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform.
   
  0.887
LOC106602366
Serine/threonine-protein kinase VRK1-like isoform X1.
   
 0.855
vrk1
Serine/threonine-protein kinase VRK1; Belongs to the protein kinase superfamily.
   
 0.855
LOC106576978
Serine/threonine-protein kinase VRK1-like isoform X1.
   
 0.855
SIRT2
NAD-dependent protein deacetylase; NAD-dependent protein deacetylase.
    
 0.818
bafb
Barrier-to-autointegration factor B isoform X1.
    
 0.799
LOC106563483
Barrier-to-autointegration factor-like.
    
 0.799
LOC106594559
Barrier-to-autointegration factor-like.
    
 0.799
LOC106576720
Barrier-to-autointegration factor-like protein.
    
 0.799
LOC106603147
Barrier-to-autointegration factor.
    
 0.799
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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