STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSSAP00000005176annotation not available (411 aa)    
Predicted Functional Partners:
LOC106590149
Charged multivesicular body protein 5.
    
 0.866
ENSSSAP00000022147
annotation not available
    
 0.866
LOC106578693
Charged multivesicular body protein 5-like.
    
 0.866
ENSSSAP00000068825
annotation not available
    
 0.866
LOC106566692
Charged multivesicular body protein 4b-like.
   
 0.748
LOC106582625
Charged multivesicular body protein 4b-like.
   
 0.748
chmp4c
Charged multivesicular body protein 4c.
   
 0.748
LOC106565064
Charged multivesicular body protein 4b.
   
 0.748
ENSSSAP00000109555
annotation not available
   
 0.748
tm9sf1
Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family.
   
 0.687
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.