STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106609576Sortilin. (821 aa)    
Predicted Functional Partners:
ENSSSAP00000011251
Neurotensin.
    
 
 0.958
LOC106573156
Neurotensin/neuromedin N-like.
    
 
 0.958
gak
cyclin-G-associated kinase isoform X1.
     
 0.873
LOC106601650
Tumor necrosis factor receptor superfamily member 16-like.
    
 
 0.844
LOC106601548
Uncharacterized protein LOC106601548; Belongs to the NGF-beta family.
    
 
 0.842
lrpap1
Alpha-2-macroglobulin receptor-associated protein isoform X1.
    
 
 0.835
psmb1
Proteasome subunit beta.
    
 
 0.829
PSMB1
Proteasome subunit beta.
    
 
 0.829
LOC106563519
Brain-derived neurotrophic factor; Promotes the survival of neuronal populations that are all located either in the central nervous system or directly connected to it; Belongs to the NGF-beta family.
    
 
 0.828
LOC106587487
Brain-derived neurotrophic factor; Promotes the survival of neuronal populations that are all located either in the central nervous system or directly connected to it; Belongs to the NGF-beta family.
    
 
 0.828
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.