STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106611846Usher syndrome type-1G protein homolog isoform X1. (497 aa)    
Predicted Functional Partners:
LOC106561052
Harmonin-like isoform X2.
    
 0.868
LOC106584586
Harmonin-like.
    
 0.868
LOC106603713
Unconventional myosin-VIIa-like isoform X9; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
 0.641
LOC106612882
Unconventional myosin-VIIa-like; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
 0.641
ENSSSAP00000121148
annotation not available
   
 0.641
ENSSSAP00000010260
Pleckstrin homology, MyTH4 and FERM domain containing H3.
   
 0.594
LOC106607315
Unconventional myosin-X-like isoform X2.
   
 0.594
LOC106568765
Unconventional myosin-VIIb-like; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
 0.594
LOC106595859
Unconventional myosin-XV-like.
   
 0.594
LOC106586950
Unconventional myosin-X-like.
   
 0.594
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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